STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTTPMicrosomal triglyceride transfer protein. (894 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B.
   
 0.968
P4HB
Protein disulfide-isomerase.
   
 0.939
G3TJ78_LOXAF
Uncharacterized protein.
   
 0.904
PDIA2
Protein disulfide isomerase family A member 2.
   
 0.802
PDIA3
Protein disulfide-isomerase.
   
 0.658
PDIA4
Protein disulfide isomerase family A member 4; Belongs to the protein disulfide isomerase family.
   
 0.658
APOA2
Apolipoprotein A2.
   
 
 0.622
LPGAT1
Lysophosphatidylglycerol acyltransferase 1.
      
 0.581
APOA4
Apolipoprotein A4.
   
 
 0.581
AASDH
Aminoadipate-semialdehyde dehydrogenase.
      
 0.580
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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