STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNCRIPSynaptotagmin binding cytoplasmic RNA interacting protein. (620 aa)    
Predicted Functional Partners:
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.894
EPRS1
Glutamyl-prolyl-tRNA synthetase.
   
 0.867
RPL13A
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
 0.841
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.809
YBX1
Y-box binding protein 1.
   
 0.804
DHX9
DExH-box helicase 9.
   
 0.765
SRSF1
Uncharacterized protein.
   
 0.738
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
0.734
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
0.731
G3T3J4_LOXAF
RRM domain-containing protein.
   
 0.730
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.