STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRCCProline rich mitotic checkpoint control factor. (491 aa)    
Predicted Functional Partners:
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.990
ZNF830
Zinc finger protein 830.
   
 
 0.985
XAB2
XPA binding protein 2.
   
 
 0.975
SNW1
SNW domain containing 1.
     
 0.972
PPIL2
Peptidylprolyl isomerase like 2.
   
 0.841
KANSL2
KAT8 regulatory NSL complex subunit 2.
   
  
 0.794
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
      
 0.711
PRPF19
Pre-mRNA processing factor 19.
    
 
 0.703
TFE3
Transcription factor binding to IGHM enhancer 3.
   
  
 0.664
ASPSCR1
TUG-UBL1 domain-containing protein.
      
 0.659
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.