STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARB1Scavenger receptor class B member 1; Belongs to the CD36 family. (361 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B.
    
 0.899
APOA4
Apolipoprotein A4.
    
 0.889
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
   
 0.823
CD81
Tetraspanin.
   
 0.749
THBS1
Thrombospondin 1.
   
 
 0.741
CD47
CD47 molecule.
   
  
 0.729
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.721
LYN
Tyrosine-protein kinase.
    
 
 0.679
APOE
Apolipoprotein E.
   
 
 0.670
THBS2
Thrombospondin 2.
   
 
 0.613
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.