STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF15TATA-box binding protein associated factor 15. (584 aa)    
Predicted Functional Partners:
TARDBP
TAR DNA binding protein.
   
 0.738
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
0.713
TAF4
TATA-box binding protein associated factor 4.
   
 0.702
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.702
G3T3J4_LOXAF
RRM domain-containing protein.
   
 0.691
TAF13
TATA-box binding protein associated factor 13.
   
 0.684
TAF5
TATA-box binding protein associated factor 5.
    
 0.684
G3U4N4_LOXAF
RRM domain-containing protein.
   
 0.682
TAF12
TATA-box binding protein associated factor 12.
   
  0.679
TAF4B
TATA-box binding protein associated factor 4b.
   
  0.679
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.