STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TKV8_LOXAFUncharacterized protein. (187 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
     
 0.984
FANCA
FA complementation group A.
     
 0.928
FAAP100
FA core complex associated protein 100.
     
 0.915
FAAP24
FA core complex associated protein 24.
     
 0.898
FANCG
FA complementation group G.
     
 0.895
FANCF
FA complementation group F.
     
 0.895
FANCB
FA complementation group B.
     
 0.890
FANCC
FA complementation group C.
     
 0.887
FANCE
FA_FANCE domain-containing protein.
     
 0.692
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
     
 0.655
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.