STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XKR6XK-related protein. (387 aa)    
Predicted Functional Partners:
CCM2
CCM2 scaffold protein.
 
    
 0.684
MTMR9
Myotubularin related protein 9.
      
 0.648
G3U3E0_LOXAF
Uncharacterized protein.
      
 0.588
HMG20A
High mobility group 20A.
      
 0.578
PCLO
Piccolo presynaptic cytomatrix protein.
      
 0.544
LCA5L
Lebercilin LCA5 like.
      
 0.538
THEMIS2
Thymocyte selection associated family member 2.
      
 0.512
MMRN1
Multimerin 1.
      
 0.499
MUC17
Uncharacterized protein.
      
 0.491
MTMR2
Myotubularin related protein 2.
      
 0.469
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.