STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22AUncharacterized protein. (196 aa)    
Predicted Functional Partners:
ACBD3
Acyl-CoA binding domain containing 3.
    
 
 0.599
MRPS6
Mitochondrial ribosomal protein S6.
    
   0.535
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.519
RAB1B
RAB1B, member RAS oncogene family.
    
 
 0.519
MOSPD3
Motile sperm domain containing 3.
      
 0.517
RBM12B
RNA binding motif protein 12B.
      
 0.517
TBC1D20
TBC1 domain family member 20.
   
 
 0.503
TRABD
TraB domain containing.
      
 0.467
MRPL21
Mitochondrial ribosomal protein L21.
    
 
 0.457
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.455
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.