STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPEB1Uncharacterized protein. (558 aa)    
Predicted Functional Partners:
AURKA
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.926
CCNB2
Cyclin B2; Belongs to the cyclin family.
   
 
 0.923
PLK1
Serine/threonine-protein kinase PLK.
   
 0.923
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.920
CPEB4
Cytoplasmic polyadenylation element binding protein 4.
   
0.919
CPEB3
Cytoplasmic polyadenylation element binding protein 3.
   
0.919
TENT2
Terminal nucleotidyltransferase 2.
   
 
 0.831
SYMPK
Symplekin.
    
 
 0.812
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.755
SSX2IP
SSX family member 2 interacting protein.
   
 
 0.672
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.