STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA1Steroid receptor RNA activator 1. (237 aa)    
Predicted Functional Partners:
DCP1A
Decapping mRNA 1A.
      
 0.578
DBP
D-box binding PAR bZIP transcription factor.
    
 
 0.545
PUS1
Pseudouridine synthase 1.
      
 0.523
TMEM245
Transmembrane protein 245.
      
 0.520
G3TAK4_LOXAF
Uncharacterized protein.
      
 0.454
RNF31
Uncharacterized protein.
      
 0.440
DCP1B
Decapping mRNA 1B.
      
 0.408
RBCK1
RANBP2-type and C3HC4-type zinc finger containing 1.
      
 0.402
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.