STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPTXRChromo domain-containing protein. (680 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
    
 0.631
RNF2
RING-type domain-containing protein.
    
 0.631
G3UB93_LOXAF
RAWUL domain-containing protein.
    
 0.631
RCN2
Reticulocalbin 2.
    
 
 0.586
G3THQ5_LOXAF
RING-type domain-containing protein.
    
 0.578
PCGF2
Polycomb group ring finger 2.
    
 0.578
PCGF5
Polycomb group ring finger 5.
    
 0.541
EED
Embryonic ectoderm development.
    
 0.516
PCGF3
Polycomb group ring finger 3.
    
 0.511
PCGF6
Polycomb group ring finger 6.
    
 0.478
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.