STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCA1LIQ motif containing with AAA domain 1 like. (860 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.946
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.671
YOD1
YOD1 deubiquitinase.
   
 0.605
UBXN1
UBX domain protein 1.
   
 0.597
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.586
FAAP100
FA core complex associated protein 100.
   
 0.586
IST1
IST1 factor associated with ESCRT-III.
    
 0.585
G3U0Z3_LOXAF
Uncharacterized protein.
    
 0.585
NAPB
NSF attachment protein beta.
    
 0.573
NAPA
NSF attachment protein alpha.
    
 0.573
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.