STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100662176Ig-like domain-containing protein; Belongs to the MHC class II family. (266 aa)    
Predicted Functional Partners:
HLA-DMA
Major histocompatibility complex, class II, DM alpha; Belongs to the MHC class II family.
   
0.984
G3SUW7_LOXAF
Ig-like domain-containing protein.
   
0.971
G3UJA6_LOXAF
Uncharacterized protein.
  
 
0.915
G3UG43_LOXAF
Ig-like domain-containing protein.
  
 
0.914
G3SMT7_LOXAF
Ig-like domain-containing protein; Belongs to the MHC class II family.
  
 
0.913
G3SUJ2_LOXAF
Uncharacterized protein.
  
 
0.913
HLA-DOA
Major histocompatibility complex, class II, DO alpha; Belongs to the MHC class II family.
  
 
0.900
G3UHG4_LOXAF
Uncharacterized protein.
  
 
0.843
LOC100667002
Uncharacterized protein.
  
 
0.842
G3SSP8_LOXAF
Ig-like domain-containing protein.
   
0.806
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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