STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MITD1Microtubule interacting and trafficking domain containing 1. (249 aa)    
Predicted Functional Partners:
CHMP1A
Charged multivesicular body protein 1A.
    
 
 0.738
CHMP1B
Uncharacterized protein.
    
 
 0.738
TMEM121
Transmembrane protein 121.
      
 0.659
PSME3
Proteasome activator subunit 3.
 
 
    0.651
CHMP2A
Charged multivesicular body protein 2A.
    
 
 0.586
TBCEL
Ubiquitin-like domain-containing protein.
      
 0.535
TXNDC9
Thioredoxin domain containing 9.
   
  
 0.531
IDS
Sulfatase domain-containing protein.
      
 0.527
MRPL30
Ribosomal_L30 domain-containing protein.
      
 0.524
CHMP5
Charged multivesicular body protein 5.
    
 
 0.516
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.