STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARHSP1Calcium regulated heat stable protein 1. (146 aa)    
Predicted Functional Partners:
COPS7A
COP9 signalosome subunit 7A.
      
 0.681
SLC38A7
Solute carrier family 38 member 7.
   
  
 0.643
PNPO
Pyridoxamine 5'-phosphate oxidase.
     
 0.608
SAMD4B
Sterile alpha motif domain containing 4B.
    
 
 0.584
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
    
 0.577
CDIP1
Cell death inducing p53 target 1.
   
 
 0.526
SRSF1
Uncharacterized protein.
  
 0.504
POLR2F
RNA polymerase II subunit F.
   
 
 0.483
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
   
 0.482
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.480
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.