STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSKH1Protein serine kinase H1; Belongs to the protein kinase superfamily. (424 aa)    
Predicted Functional Partners:
DCX
Doublecortin.
 
  
 
 0.850
MPP1
Membrane palmitoylated protein 1; Belongs to the MAGUK family.
 
 
 0.603
TMEM129
Transmembrane protein 129.
   
    0.502
CALM3
Calmodulin 3; Belongs to the calmodulin family.
   
 0.462
CALM1
Calmodulin 1; Belongs to the calmodulin family.
   
 0.462
EFCAB13
EF-hand calcium binding domain 13.
   
 0.462
CALML5
Calmodulin like 5.
   
 0.462
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
   
 0.462
G3T4H9_LOXAF
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.462
EFCAB3
EF-hand calcium binding domain 3.
   
 0.462
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.