STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKBP9Peptidylprolyl isomerase. (572 aa)    
Predicted Functional Partners:
KCNH8
Potassium voltage-gated channel subfamily H member 8.
   
 
 0.716
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.646
NR2C1
Nuclear receptor subfamily 2 group C member 1.
    
 0.636
ZIC4
Zic family member 4.
    
 
 0.572
G3TR29_LOXAF
SCAN box domain-containing protein.
   
 
 0.557
ZMYM4
Zinc finger MYM-type containing 4.
    
 0.537
FHL2
Four and a half LIM domains 2.
   
  
 0.530
ZIC1
Zic family member 1.
    
 
 0.525
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.493
SERP2
Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family.
   
  
 0.485
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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