STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF13PHD finger protein 13. (301 aa)    
Predicted Functional Partners:
MCRS1
Microspherule protein 1.
   
 0.797
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.741
TEX30
Testis expressed 30.
    
 0.716
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.716
KDM6A
Lysine demethylase 6A.
   
 
 0.553
COIL
Coilin.
    
 
 0.514
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
    
 
 0.514
TBL1X
Uncharacterized protein.
    
 
 0.514
TTC6
Tetratricopeptide repeat domain 6.
   
 0.507
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 0.507
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.