STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC4Tetratricopeptide repeat domain 4. (386 aa)    
Predicted Functional Partners:
HGH1
HGH1 homolog.
   
 
 0.979
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.777
TTC26
Tetratricopeptide repeat domain 26.
   
 0.679
TRAP1
TNF receptor associated protein 1.
   
 0.670
TSC1
TSC complex subunit 1.
   
 0.659
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
   
 0.659
HSP90AA1
HATPase_c domain-containing protein.
   
 0.659
G3ULS6_LOXAF
Uncharacterized protein.
   
 0.659
TTC5
Tetratricopeptide repeat domain 5.
  
 
 0.630
PTGES3
CS domain-containing protein.
   
 0.601
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.