STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX1T-box transcription factor 1. (503 aa)    
Predicted Functional Partners:
MGA
MAX dimerization protein MGA.
 
    
 0.856
SOX3
SRY-box transcription factor 3.
      
 0.634
GNB1L
G protein subunit beta 1 like.
      
 0.563
NKX2-5
NK2 homeobox 5.
    
 
 0.553
HMX3
H6 family homeobox 3.
    
 
 0.547
RCHY1
Ring finger and CHY zinc finger domain containing 1.
   
    0.542
CFAP54
Uncharacterized protein.
   
  
 0.512
G3SVH3_LOXAF
Uncharacterized protein.
   
  
 0.512
TMEM26
Transmembrane protein 26.
      
 0.448
CRKL
CRK like proto-oncogene, adaptor protein.
      
 0.442
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.