STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC25Tetratricopeptide repeat domain 25. (630 aa)    
Predicted Functional Partners:
ARMC4
Armadillo repeat containing 4.
  
 
 0.874
CCDC151
Coiled-coil domain containing 151.
   
 0.791
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.777
CCDC114
Coiled-coil domain containing 114.
   
 
 0.776
CNP
2',3'-cyclic-nucleotide 3'-phosphodiesterase; May participate in RNA metabolism in the myelinating cell, CNP is the third most abundant protein in central nervous system myelin; Belongs to the 2H phosphoesterase superfamily. CNPase family.
 
  
   0.766
TEKT1
Tektin 1.
   
 
 0.724
EFCAB1
EF-hand calcium binding domain 1.
   
 0.722
CCDC63
Coiled-coil domain containing 63.
   
 
 0.681
DRC7
Dynein regulatory complex subunit 7.
      
 0.649
G3U5R6_LOXAF
Uncharacterized protein.
   
 0.639
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.