STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACS1Phosphofurin acidic cluster sorting protein 1. (959 aa)    
Predicted Functional Partners:
WDR37
WD repeat domain 37.
    
 
 0.842
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
    
 
 0.557
PDZD8
PDZ domain containing 8.
      
 0.521
PKD2
Polycystin 2, transient receptor potential cation channel.
      
 0.517
CPD
Carboxypeptidase D.
      
 0.516
MRPL38
Mitochondrial ribosomal protein L38.
      
 0.513
BCAP29
B cell receptor associated protein 29.
      
 0.455
BCAP31
B cell receptor associated protein 31.
      
 0.455
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.