STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARD9Caspase recruitment domain family member 9. (537 aa)    
Predicted Functional Partners:
NOD2
Nucleotide binding oligomerization domain containing 2.
   
 
 0.832
MALT1
MALT1 paracaspase.
    
 0.748
SYK
Tyrosine-protein kinase.
   
 0.742
PRKCD
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.700
CLEC7A
C-type lectin domain containing 7A.
   
  
 0.671
TRIM62
Tripartite motif containing 62.
   
 
 0.661
GRB14
Growth factor receptor bound protein 14.
      
 0.641
NOD1
Nucleotide binding oligomerization domain containing 1.
   
 
 0.602
VAV2
Vav guanine nucleotide exchange factor 2.
      
 0.564
PRKCQ
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.559
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.