STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TQ57_LOXAFBrix domain-containing protein. (461 aa)    
Predicted Functional Partners:
P2RY11
Purinergic receptor P2Y11; Belongs to the G-protein coupled receptor 1 family.
 
      0.895
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.879
SURF6
Surfeit 6.
   
 
 0.876
RSL1D1
Ribosomal L1 domain containing 1.
   
   0.872
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 
 0.854
RPF1
Ribosome production factor 1 homolog.
   
 
 0.850
DDX27
DEAD-box helicase 27; Belongs to the DEAD box helicase family.
   
   0.848
DDX56
DEAD-box helicase 56.
   
   0.839
NOC2L
Uncharacterized protein.
   
 
 0.838
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.835
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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