STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAF11RING-type domain-containing protein. (1402 aa)    
Predicted Functional Partners:
ARID2
AT-rich interaction domain 2.
   
  
 0.629
TMEM117
Transmembrane protein 117.
      
 0.579
BCLAF1
BCL2 associated transcription factor 1.
  
   0.578
NIPBL
Nipped-B protein.
   
  
 0.542
THOC2
THO complex 2.
   
    0.522
ANO6
Anoctamin.
      
 0.515
ATRX
ATRX chromatin remodeler.
   
   0.503
DBX2
Developing brain homeobox 2.
      
 0.499
THRAP3
Thyroid hormone receptor associated protein 3.
  
 
 0.489
NELL2
Neural EGFL like 2.
    
 
 0.458
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.