STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTMAUncharacterized protein. (114 aa)    
Predicted Functional Partners:
KEAP1
Kelch like ECH associated protein 1.
    
 
 0.929
RPS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
  
 0.752
H1-0
H1 histone family member 0.
    
 
 0.729
KLHL17
Kelch like family member 17.
    
 
 0.713
RPL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
    0.688
HMGB1
Uncharacterized protein.
   
 
 0.675
RPS19
Ribosomal protein S19.
   
    0.669
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
    0.660
KLHL18
Kelch like family member 18.
    
 
 0.609
RPL13A
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
    0.599
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.