STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR82WD repeat domain 82. (312 aa)    
Predicted Functional Partners:
WDR33
WD repeat domain 33.
   
 0.994
FIP1L1
Factor interacting with PAPOLA and CPSF1.
   
 0.992
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.992
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.992
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.990
SYMPK
Symplekin.
   
 
 0.988
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.984
CXXC1
CXXC finger protein 1.
   
 0.983
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
   
 0.970
SSU72
Uncharacterized protein.
   
 0.963
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.