STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TRJ4_LOXAFUncharacterized protein. (126 aa)    
Predicted Functional Partners:
G3TBQ3_LOXAF
Uncharacterized protein.
 
     0.916
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.614
ITSN2
Intersectin 2.
    
  0.564
G3U095_LOXAF
Uncharacterized protein.
    
  0.564
WLS
Wnt ligand secretion mediator.
    
 0.532
FAM131B
Family with sequence similarity 131 member B.
     
 0.498
RYK
Receptor like tyrosine kinase.
    
 0.462
NOTCH2
Notch receptor 2.
    
 
 0.456
PRPH2
Peripherin 2.
      
 0.443
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.