STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSPT2G1 to S phase transition 2. (643 aa)    
Predicted Functional Partners:
ETF1
Eukaryotic translation termination factor 1.
   
 0.999
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.945
GSPT1
G1 to S phase transition 1.
  
  
0.924
PAPSS1
3'-phosphoadenosine 5'-phosphosulfate synthase 1.
 
  
   0.903
PAPSS2
3'-phosphoadenosine 5'-phosphosulfate synthase 2.
 
  
   0.903
UPF1
UPF1 RNA helicase and ATPase.
    
 0.891
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.883
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.867
G3TRE8_LOXAF
Ubiquitin-like domain-containing protein.
    
 0.867
EPRS1
Glutamyl-prolyl-tRNA synthetase.
   
  0.851
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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