STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TRQ7_LOXAFEpimerase domain-containing protein. (228 aa)    
Predicted Functional Partners:
SDS
Serine dehydratase.
   
 
 0.924
SDSL
Serine dehydratase like.
   
 
 0.924
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.860
G3TRE8_LOXAF
Ubiquitin-like domain-containing protein.
   
 0.860
IVD
Isovaleryl-CoA dehydrogenase.
   
 
 0.762
SCP2
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
  
 0.732
RPS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.731
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.723
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.710
RPS10
Ribosomal protein S10.
   
 0.709
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.