STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TRR6_LOXAFUncharacterized protein. (486 aa)    
Predicted Functional Partners:
SPRTN
SprT-like N-terminal domain.
   
    0.818
USP7
Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family.
   
 0.754
NEDD4
E3 ubiquitin-protein ligase.
    
 0.696
WWP2
E3 ubiquitin-protein ligase.
   
 0.673
FRK
Tyrosine-protein kinase.
    
 0.642
USP40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
   
 0.633
OTUD3
OTU deubiquitinase 3.
    
 0.618
TRIM27
Tripartite motif containing 27.
    
 0.595
STUB1
STIP1 homology and U-box containing protein 1.
   
 0.591
WWP1
E3 ubiquitin-protein ligase.
   
 0.590
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.