STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH2LG-patch domain containing 2 like. (475 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
    
 0.905
DDX10
RNA helicase.
    
 0.837
NOL6
Nucleolar protein 6.
   
 
 0.824
DDX18
RNA helicase.
    
 0.822
BYSL
Bystin like.
    
 
 0.817
UTP6
UTP6 small subunit processome component.
    
 
 0.811
NOM1
Nucleolar protein with MIF4G domain 1.
   
   0.806
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.805
UTP3
UTP3 small subunit processome component.
   
   0.805
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
    
   0.804
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.