STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CERKLCeramide kinase like. (482 aa)    
Predicted Functional Partners:
ASAH2
Neutral ceramidase.
    
 0.546
ENO4
Enolase 4.
   
  
 0.545
DNAH10
Dynein axonemal heavy chain 10.
   
    0.542
VWA3A
Von Willebrand factor A domain containing 3A.
   
    0.542
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
   
 
 0.538
KDSR
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.530
SGPL1
Sphingosine-1-phosphate lyase 1.
   
 0.468
PRPF3
Pre-mRNA processing factor 3.
   
  
 0.462
PROM1
Prominin 1.
      
 0.456
ABCA4
ATP binding cassette subfamily A member 4.
   
  
 0.451
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.