STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN6Tetraspanin. (244 aa)    
Predicted Functional Partners:
PICK1
Protein interacting with PRKCA 1.
     
 0.545
G3STC6_LOXAF
Uncharacterized protein.
      
 0.520
C3orf14
Chromosome 3 open reading frame 14.
      
 0.474
OTULINL
OTU deubiquitinase with linear linkage specificity like.
      
 0.473
TSPAN13
Tetraspanin 13; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.466
FRMPD4
FERM and PDZ domain containing 4.
      
 0.447
TSG101
Tumor susceptibility 101.
      
 0.445
TTC1
TPR_REGION domain-containing protein.
      
 0.439
LCP2
Lymphocyte cytosolic protein 2.
   
  
 0.429
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.424
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.