STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TT65_LOXAFUncharacterized protein. (117 aa)    
Predicted Functional Partners:
ELOVL4
Elongation of very long chain fatty acids protein 4; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that specifically elongates C24:0 and C26:0 acyl-CoAs. May participate to the production of saturated and monounsaturated VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane [...]
      
 0.597
PRPH2
Peripherin 2.
   
 
 0.569
GUCA1B
Guanylate cyclase activator 1B.
    
 
 0.497
RGCC
Regulator of cell cycle.
      
 0.489
IDUA
Iduronidase alpha-L-.
      
 0.489
CABP4
Uncharacterized protein.
      
 0.488
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
      
 0.472
FREM1
FRAS1 related extracellular matrix 1.
     
  0.461
IL1A
Interleukin-1; Belongs to the IL-1 family.
      
 0.434
EFEMP1
EGF containing fibulin extracellular matrix protein 1.
     
 0.422
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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