STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBLN2C1q domain-containing protein. (109 aa)    
Predicted Functional Partners:
OSTN
Osteocrin.
      
 0.514
FZD8
Frizzled class receptor 8; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 
 0.506
ACVRL1
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.482
ABCC8
ATP binding cassette subfamily C member 8.
   
  
 0.473
KCNK3
Potassium channel subfamily K member.
   
  
 0.462
MMACHC
Metabolism of cobalamin associated C.
      
 0.457
EIF2AK4
Eukaryotic translation initiation factor 2 alpha kinase 4.
      
 0.455
FAM78A
Family with sequence similarity 78 member A.
  
 
 
 0.434
FAM78B
Family with sequence similarity 78 member B.
  
 
 
 0.407
GDF2
Growth differentiation factor 2.
    
 
 0.404
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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