STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TUX7_LOXAFUncharacterized protein. (164 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
 
 
 
 0.902
PRPF3
Pre-mRNA processing factor 3.
   
 
 0.825
DHX38
DEAH-box helicase 38.
 
 
 0.822
DHX35
DEAH-box helicase 35.
 
 
 
 0.820
DHX16
DEAH-box helicase 16.
 
 
 0.809
SLU7
SLU7 homolog, splicing factor.
   
 0.802
CDC40
Cell division cycle 40.
   
 0.802
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.784
PRPF18
SFM domain-containing protein.
   
 0.774
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 0.769
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.