STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TUY3_LOXAFBMERB domain-containing protein. (706 aa)    
Predicted Functional Partners:
MICAL2
Microtubule associated monooxygenase, calponin and LIM domain containing 2.
 
      0.900
RAB8B
RAB8B, member RAS oncogene family.
   
 
 0.572
RAB8A
RAB8A, member RAS oncogene family.
   
 
 0.572
RAB10
RAB10, member RAS oncogene family.
   
 
 0.441
MICAL3
Uncharacterized protein.
 
  
 
 0.419
G3SZ48_LOXAF
Uncharacterized protein.
   
 
0.409
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.