STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TV15_LOXAFRibosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (156 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.993
G3TRE8_LOXAF
Ubiquitin-like domain-containing protein.
   
 0.993
RPL17
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.890
RPL14
Ribosomal_L14e domain-containing protein.
  
 0.886
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.885
RPL4
Ribosomal protein L4.
  
 0.883
RPL24
Ribosomal protein L24.
   
 0.881
G3U7E9_LOXAF
Uncharacterized protein.
   
 0.879
RPL38
Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.877
G3UJ51_LOXAF
Uncharacterized protein.
   
 0.877
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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