Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD40LG | CD44 | ENSLAFP00000004664 | ENSLAFP00000014823 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | CD44 molecule (Indian blood group). | 0.405 |
CD40LG | G3TVI4_LOXAF | ENSLAFP00000004664 | ENSLAFP00000019592 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Uncharacterized protein. | 0.708 |
CD40LG | ITGB2 | ENSLAFP00000004664 | ENSLAFP00000024133 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Integrin beta. | 0.587 |
CD44 | CD40LG | ENSLAFP00000014823 | ENSLAFP00000004664 | CD44 molecule (Indian blood group). | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.405 |
CD44 | G3TVI4_LOXAF | ENSLAFP00000014823 | ENSLAFP00000019592 | CD44 molecule (Indian blood group). | Uncharacterized protein. | 0.604 |
CD44 | ITGB2 | ENSLAFP00000014823 | ENSLAFP00000024133 | CD44 molecule (Indian blood group). | Integrin beta. | 0.539 |
CD44 | RDX | ENSLAFP00000014823 | ENSLAFP00000012502 | CD44 molecule (Indian blood group). | Radixin. | 0.939 |
CD44 | SELE | ENSLAFP00000014823 | ENSLAFP00000006032 | CD44 molecule (Indian blood group). | Selectin E. | 0.625 |
CD44 | SELL | ENSLAFP00000014823 | ENSLAFP00000006026 | CD44 molecule (Indian blood group). | L-selectin; Calcium-dependent lectin that mediates cell adhesion by binding to glycoproteins on neighboring cells. Mediates the adherence of lymphocytes to endothelial cells of high endothelial venules in peripheral lymph nodes. Promotes initial tethering and rolling of leukocytes in endothelia. | 0.572 |
CD44 | SELP | ENSLAFP00000014823 | ENSLAFP00000012178 | CD44 molecule (Indian blood group). | Selectin P. | 0.625 |
CD44 | SPN | ENSLAFP00000014823 | ENSLAFP00000008491 | CD44 molecule (Indian blood group). | Sialophorin. | 0.577 |
CD44 | VCAM1 | ENSLAFP00000014823 | ENSLAFP00000002650 | CD44 molecule (Indian blood group). | Vascular cell adhesion molecule 1. | 0.723 |
F3 | G3TVI4_LOXAF | ENSLAFP00000010371 | ENSLAFP00000019592 | Tissue factor; Initiates blood coagulation by forming a complex with circulating factor VII or VIIa. The [TF:VIIa] complex activates factors IX or X by specific limited proteolysis. TF plays a role in normal hemostasis by initiating the cell-surface assembly and propagation of the coagulation protease cascade. | Uncharacterized protein. | 0.566 |
F3 | VCAM1 | ENSLAFP00000010371 | ENSLAFP00000002650 | Tissue factor; Initiates blood coagulation by forming a complex with circulating factor VII or VIIa. The [TF:VIIa] complex activates factors IX or X by specific limited proteolysis. TF plays a role in normal hemostasis by initiating the cell-surface assembly and propagation of the coagulation protease cascade. | Vascular cell adhesion molecule 1. | 0.525 |
G3TVI4_LOXAF | CD40LG | ENSLAFP00000019592 | ENSLAFP00000004664 | Uncharacterized protein. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.708 |
G3TVI4_LOXAF | CD44 | ENSLAFP00000019592 | ENSLAFP00000014823 | Uncharacterized protein. | CD44 molecule (Indian blood group). | 0.604 |
G3TVI4_LOXAF | F3 | ENSLAFP00000019592 | ENSLAFP00000010371 | Uncharacterized protein. | Tissue factor; Initiates blood coagulation by forming a complex with circulating factor VII or VIIa. The [TF:VIIa] complex activates factors IX or X by specific limited proteolysis. TF plays a role in normal hemostasis by initiating the cell-surface assembly and propagation of the coagulation protease cascade. | 0.566 |
G3TVI4_LOXAF | ITGB2 | ENSLAFP00000019592 | ENSLAFP00000024133 | Uncharacterized protein. | Integrin beta. | 0.709 |
G3TVI4_LOXAF | RDX | ENSLAFP00000019592 | ENSLAFP00000012502 | Uncharacterized protein. | Radixin. | 0.773 |
G3TVI4_LOXAF | SELE | ENSLAFP00000019592 | ENSLAFP00000006032 | Uncharacterized protein. | Selectin E. | 0.832 |
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