STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DESI1Desumoylating isopeptidase 1. (139 aa)    
Predicted Functional Partners:
UBQLN4
Ubiquilin 4.
    
 
 0.921
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
   0.911
PSMC5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
   0.908
PSMC4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
   
   0.908
PSMC3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
   
   0.908
PSMD11
Proteasome 26S subunit, non-ATPase 11.
    
   0.907
PSMD8
Proteasome 26S subunit, non-ATPase 8.
    
   0.907
PSMC1
Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family.
    
   0.907
PSMA1
Proteasome subunit alpha type.
    
   0.907
BAG6
BCL2 associated athanogene 6.
    
   0.907
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.