STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSNBassoon presynaptic cytomatrix protein. (3769 aa)    
Predicted Functional Partners:
APEH
Acylaminoacyl-peptide hydrolase.
 
    
 0.621
CTBP2
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.585
CTBP1
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.585
PCLO
Piccolo presynaptic cytomatrix protein.
  
0.574
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 
 0.567
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
   
  
 0.567
TMEM169
Transmembrane protein 169.
      
 0.527
PNN
Pinin, desmosome associated protein.
   
    0.502
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.496
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.487
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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