STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF408Zinc finger protein 408. (623 aa)    
Predicted Functional Partners:
GPATCH3
G-patch domain containing 3.
   
    0.944
TSPAN12
Tetraspanin.
      
 0.571
MVK
Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
   
 
 0.571
NDP
Norrin cystine knot growth factor NDP.
    
 
 0.526
RNF25
Ring finger protein 25.
   
    0.513
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase.
   
 
 0.478
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.468
GRAMD4
GRAM domain containing 4.
    
 0.415
CCNJ
Cyclin J; Belongs to the cyclin family.
   
 0.405
GP9
Glycoprotein IX platelet.
    
 0.402
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.