STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TVZ6_LOXAFUncharacterized protein. (179 aa)    
Predicted Functional Partners:
PARP4
Poly [ADP-ribose] polymerase.
 
     0.930
G3UBL3_LOXAF
Uncharacterized protein.
   
 
 0.697
PARG
Poly(ADP-ribose) glycohydrolase.
    
 0.672
TEP1
Telomerase associated protein 1.
    
 
 0.547
XRCC5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
   
 
 0.528
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.510
HPF1
Histone PARylation factor 1.
    
 
 0.510
EXO1
Exonuclease 1.
   
 0.477
BRCA2
BRCA2 DNA repair associated.
    
 0.458
XPA
XPA, DNA damage recognition and repair factor.
     
 0.452
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.