STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF151Ring finger protein 151. (236 aa)    
Predicted Functional Partners:
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.703
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.680
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.645
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.592
TRADD
TNFRSF1A associated via death domain.
    
 0.558
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.555
G3U9C8_LOXAF
Ubiquitin-like domain-containing protein.
    
 0.555
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.495
ECSIT
ECSIT signalling integrator.
    
 0.493
TIFA
TRAF interacting protein with forkhead associated domain.
    
 0.472
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.