STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL4LHFPL tetraspan subfamily member 4. (248 aa)    
Predicted Functional Partners:
PCDH15
Protocadherin related 15.
   
 0.664
CDHR5
Cadherin related family member 5.
   
 0.660
CIB2
Calcium and integrin binding family member 2.
   
 
 0.612
TMC1
Transmembrane channel-like protein.
   
 
 0.607
THUMPD3
THUMP domain containing 3.
      
 0.520
TMIE
Transmembrane inner ear.
     
 0.519
CIB3
Calcium and integrin binding family member 3.
   
 
 0.457
NLGN2
Neuroligin 2.
   
  
 0.457
CIB1
Calcium and integrin binding 1.
   
 
 0.457
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
  
 0.452
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.