STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CELF5RRM domain-containing protein. (380 aa)    
Predicted Functional Partners:
RBM24
RNA binding motif protein 24.
  
   
 0.555
RBFOX3
RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events.
  
  
 0.524
RBM3
RNA binding motif protein 3.
  
   
 0.512
HNRNPA0
Uncharacterized protein.
  
   
 0.494
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
  
   
 0.479
TRA2A
Transformer 2 alpha homolog.
  
   
 0.473
TRA2B
Transformer 2 beta homolog.
  
   
 0.454
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
  
   
 0.444
HNRNPA1
Uncharacterized protein.
  
   
 0.436
G3TVP3_LOXAF
Uncharacterized protein.
  
   
 0.434
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.