STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEX13ARanBP2-type domain-containing protein. (385 aa)    
Predicted Functional Partners:
ZNF711
Zinc finger protein 711.
   
  
 0.523
AMDHD2
N-acetylglucosamine-6-phosphate deacetylase; Hydrolyzes the N-glycolyl group from N-glycolylglucosamine 6- phosphate (GlcNGc-6-P) in the N-glycolylneuraminic acid (Neu5Gc) degradation pathway.
      
 0.521
UTP4
UTP4 small subunit processome component.
   
  
 0.517
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
  
 0.485
CNOT7
CCR4-NOT transcription complex subunit 7.
    
   0.469
YTHDC2
YTH domain containing 2.
   
  
 0.461
SPCS2
Signal peptidase complex subunit 2.
      
 0.457
TRAPPC4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
      
 0.453
ORC2
Origin recognition complex subunit 2.
      
 0.450
BTG3
BTG anti-proliferation factor 3.
    
   0.448
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.