STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC141Coiled-coil domain containing 141. (655 aa)    
Predicted Functional Partners:
G3UIT9_LOXAF
Uncharacterized protein.
 
 
  
 0.654
WDR18
WD repeat domain 18.
   
 0.626
TEX10
Testis expressed 10.
   
 0.588
CER1
Cerberus 1, DAN family BMP antagonist.
   
  
 0.580
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.571
TCAP
Titin-cap.
   
 0.512
CUL7
Cullin 7; Belongs to the cullin family.
    
 0.480
MYL1
Myosin light chain 1.
   
 0.476
CCDC8
Coiled-coil domain containing 8.
   
 0.467
EFCAB11
EF-hand calcium binding domain 11.
    
 0.466
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.