STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNRC2Proline rich nuclear receptor coactivator 2. (140 aa)    
Predicted Functional Partners:
DCP1A
Decapping mRNA 1A.
    
 0.862
DCP1B
Decapping mRNA 1B.
    
 0.795
SMG8
SMG8 nonsense mediated mRNA decay factor.
     
 0.709
SMG5
SMG5 nonsense mediated mRNA decay factor.
     
 0.704
UPF1
UPF1 RNA helicase and ATPase.
    
 0.677
SMG9
SMG9 nonsense mediated mRNA decay factor.
     
 0.668
DCP2
Decapping mRNA 2.
    
 
 0.648
SMG7
SMG7 nonsense mediated mRNA decay factor.
     
 0.604
G3UN69_LOXAF
Uncharacterized protein.
     
 0.566
SMG6
SMG6 nonsense mediated mRNA decay factor.
     
 0.552
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.